14 Useful databases
14.1 Downloading genome reference files
| Species | Version | Command |
|---|---|---|
| human | GRCh38/hg38 | wget https://hgdownload.soe.ucsc.edu/goldenPath/hg38/bigZips/hg38.fa.gz |
| human | GRCh37/hg19 | wget https://hgdownload.soe.ucsc.edu/goldenPath/hg19/bigZips/hg19.fa.gz |
| mouse | GRCm39/mm39 | wget https://hgdownload.soe.ucsc.edu/goldenPath/mm39/bigZips/mm39.fa.gz |
| mouse | GRCm38/mm10 | wget https://hgdownload.soe.ucsc.edu/goldenPath/mm10/bigZips/mm10.fa.gz |