DNA
5
Variant calling
Bioinformatics for Disease
Preface
1
Molecular Sequencing: Concepts and Technologies
Data skills
2
Common data visualization techniques
DNA
3
Aligning DNA sequences
4
DNA quality control
5
Variant calling
RNA
6
Aligning RNA sequences
7
RNA quality control
8
Differential expression analysis
9
Gene set enrichment analysis (GSEA)
Infectious Disease
Heritable Disease
Cancer
10
Cancer drivers
11
Driver enrichment
12
Driver enrichment
Appendices
13
Reference versions
14
Useful databases
References
5
Variant calling
4
DNA quality control
RNA